HL_6LSR_042
3D structure
- PDB id
- 6LSR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a pre-60S ribosomal subunit - state B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- GUUCGCC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6LSR_042 not in the Motif Atlas
- Geometric match to HL_2CZJ_007
- Geometric discrepancy: 0.2683
- The information below is about HL_2CZJ_007
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_23696.2
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 8
Unit IDs
6LSR|1|2|G|2664
6LSR|1|2|U|2665
6LSR|1|2|U|2666
6LSR|1|2|C|2667
6LSR|1|2|G|2668
6LSR|1|2|C|2669
6LSR|1|2|C|2670
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain X
- 60S ribosomal protein L37a
- Chain a
- 60S ribosomal protein L19
Coloring options: