HL_6LSR_043
3D structure
- PDB id
- 6LSR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a pre-60S ribosomal subunit - state B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- CGGG
- Length
- 4 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6LSR_043 not in the Motif Atlas
- Homologous match to HL_8C3A_039
- Geometric discrepancy: 0.552
- The information below is about HL_8C3A_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
6LSR|1|2|C|2704
6LSR|1|2|G|2705
6LSR|1|2|G|2706
6LSR|1|2|G|2712
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 0
- Zinc finger protein 622
- Chain a
- 60S ribosomal protein L19
- Chain d
- 60S ribosomal protein L22
- Chain z
- Proliferation-associated protein 2G4
Coloring options: