HL_6LU8_063

3D structure

PDB id

6LU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-60S ribosomal subunit - state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CGUUCAUAG

Length

9 nucleotides

Bulged bases

6LU8|1|2|U|4419

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6LU8_063 not in the Motif Atlas

Homologous match to HL_8C3A_062

Geometric discrepancy: 0.4103

The information below is about HL_8C3A_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_82661.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6LU8|1|2|C|4417
6LU8|1|2|G|4418
6LU8|1|2|U|4419
6LU8|1|2|U|4420
6LU8|1|2|C|4421
6LU8|1|2|A|4422
6LU8|1|2|U|4423
6LU8|1|2|A|4424
6LU8|1|2|G|4425

Current chains

Chain 2

28S rRNA

Nearby chains

Chain R

Translation machinery-associated protein 16