HL_6MTC_030
3D structure
- PDB id
- 6MTC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUGGUGUG
- Length
- 8 nucleotides
- Bulged bases
- 6MTC|1|5|G|1821
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6MTC_030 not in the Motif Atlas
- Geometric match to HL_5J7L_024
- Geometric discrepancy: 0.3928
- The information below is about HL_5J7L_024
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_77436.5
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
6MTC|1|5|C|1816
6MTC|1|5|U|1817
6MTC|1|5|G|1818
6MTC|1|5|G|1819
6MTC|1|5|U|1820
6MTC|1|5|G|1821
6MTC|1|5|U|1822
6MTC|1|5|G|1823
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L5
- Chain T
- 60S ribosomal protein L21
- Chain b
- 60S ribosomal protein L29
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