HL_6N1D_052
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6N1D_052 not in the Motif Atlas
- Homologous match to HL_5J7L_152
- Geometric discrepancy: 0.1281
- The information below is about HL_5J7L_152
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
6N1D|1|A23S|G|629
6N1D|1|A23S|G|630
6N1D|1|A23S|A|631
6N1D|1|A23S|A|632
6N1D|1|A23S|A|633
6N1D|1|A23S|C|634
Current chains
- Chain A23S
- 23S rRNA
Nearby chains
- Chain AL15
- 50S ribosomal protein L15
- Chain AL35
- 50S ribosomal protein L35
Coloring options: