3D structure

PDB id
6NU2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
UGUAGCAAAA
Length
10 nucleotides
Bulged bases
6NU2|1|A|A|1957, 6NU2|1|A|A|1961
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NU2_008 not in the Motif Atlas
Homologous match to HL_8VTW_022
Geometric discrepancy: 0.2673
The information below is about HL_8VTW_022
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_39334.8
Basepair signature
cWW-cWS-tSW-F-F
Number of instances in this motif group
7

Unit IDs

6NU2|1|A|U|1954
6NU2|1|A|G|1955
6NU2|1|A|U|1956
6NU2|1|A|A|1957
6NU2|1|A|G|1958
6NU2|1|A|C|1959
6NU2|1|A|A|1960
6NU2|1|A|A|1961
6NU2|1|A|A|1962
6NU2|1|A|A|1963

Current chains

Chain A
16S rRNA

Nearby chains

Chain 2
39S ribosomal protein L34, mitochondrial
Chain E
39S ribosomal protein L3, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial

Coloring options:


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