3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
UUUACCAAAAA
Length
11 nucleotides
Bulged bases
6NU3|1|A|A|2500, 6NU3|1|A|C|2501, 6NU3|1|A|C|2502, 6NU3|1|A|A|2506
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NU3_022 not in the Motif Atlas
Homologous match to HL_4WF9_043
Geometric discrepancy: 0.3272
The information below is about HL_4WF9_043
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_87681.1
Basepair signature
cWW-cWW-tWH-F-tWH-F-F-F-F-F
Number of instances in this motif group
9

Unit IDs

6NU3|1|A|U|2497
6NU3|1|A|U|2498
6NU3|1|A|U|2499
6NU3|1|A|A|2500
6NU3|1|A|C|2501
6NU3|1|A|C|2502
6NU3|1|A|A|2503
6NU3|1|A|A|2504
6NU3|1|A|A|2505
6NU3|1|A|A|2506
6NU3|1|A|A|2507

Current chains

Chain A
16S rRNA

Nearby chains

Chain 2
39S ribosomal protein L34, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial

Coloring options:


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