3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
UCAACAAA
Length
8 nucleotides
Bulged bases
6NU3|1|AA|C|1120, 6NU3|1|AA|A|1125
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NU3_051 not in the Motif Atlas
Geometric match to HL_2Y8W_001
Geometric discrepancy: 0.3935
The information below is about HL_2Y8W_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_40612.1
Basepair signature
cWW
Number of instances in this motif group
3

Unit IDs

6NU3|1|AA|U|1115
6NU3|1|AA|C|1120
6NU3|1|AA|A|1121
6NU3|1|AA|A|1122
6NU3|1|AA|C|1123
6NU3|1|AA|A|1124
6NU3|1|AA|A|1125
6NU3|1|AA|A|1126

Current chains

Chain AA
12S rRNA

Nearby chains

Chain A2
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
Chain AB
28S ribosomal protein S2, mitochondrial
Chain AD
28S ribosomal protein S5, mitochondrial
Chain AE
28S ribosomal protein S6, mitochondrial
Chain AS
28S ribosomal protein S23, mitochondrial

Coloring options:


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