3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
ACUUACACU
Length
9 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NU3_062 not in the Motif Atlas
Geometric match to HL_5T83_002
Geometric discrepancy: 0.3054
The information below is about HL_5T83_002
Detailed Annotation
Anticodon loop related
Broad Annotation
Guanidine riboswitch aptamer P2 hairpin
Motif group
HL_81376.2
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
42

Unit IDs

6NU3|1|B|A|1630
6NU3|1|B|C|1631
6NU3|1|B|U|1632
6NU3|1|B|U|1633
6NU3|1|B|A|1634
6NU3|1|B|C|1635
6NU3|1|B|A|1636
6NU3|1|B|C|1637
6NU3|1|B|U|1638

Current chains

Chain B
mt-tRNAVal

Nearby chains

Chain 6
39S ribosomal protein L38, mitochondrial
Chain 8
39S ribosomal protein L40, mitochondrial
Chain P
39S ribosomal protein L18, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain e
39S ribosomal protein L46, mitochondrial
Chain f
39S ribosomal protein L48, mitochondrial
Chain m
39S ribosomal protein L55, mitochondrial

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