HL_6NUO_089

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

6NUO|1|RA|A|2280, 6NUO|1|RA|C|2287

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_089 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0685

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

6NUO|1|RA|C|2276
6NUO|1|RA|U|2277
6NUO|1|RA|A|2278
6NUO|1|RA|A|2279
6NUO|1|RA|A|2280
6NUO|1|RA|A|2281
6NUO|1|RA|G|2282
6NUO|1|RA|G|2283
6NUO|1|RA|U|2284
6NUO|1|RA|A|2285
6NUO|1|RA|A|2286
6NUO|1|RA|C|2287
6NUO|1|RA|G|2288

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R0

50S ribosomal protein L27

Chain RQ

50S ribosomal protein L16