HL_6NUO_096

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UGAAGAAG

Length

8 nucleotides

Bulged bases

6NUO|1|RA|G|2541

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_096 not in the Motif Atlas

Homologous match to HL_7RQB_061

Geometric discrepancy: 0.0822

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

6NUO|1|RA|U|2540
6NUO|1|RA|G|2541
6NUO|1|RA|A|2542
6NUO|1|RA|A|2543
6NUO|1|RA|G|2544
6NUO|1|RA|A|2545
6NUO|1|RA|A|2546
6NUO|1|RA|G|2547

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36

Chain RH

50S ribosomal protein L6