HL_6NUO_131

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

6NUO|1|XA|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_131 not in the Motif Atlas

Homologous match to HL_6CZR_096

Geometric discrepancy: 0.1888

The information below is about HL_6CZR_096

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

24

Unit IDs

6NUO|1|XA|G|1089
6NUO|1|XA|U|1090
6NUO|1|XA|U|1091
6NUO|1|XA|A|1092
6NUO|1|XA|A|1093
6NUO|1|XA|G|1094
6NUO|1|XA|U|1095
6NUO|1|XA|C|1096

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XB

30S ribosomal protein S2

Chain XG

30S ribosomal protein S7