HL_6NUO_142

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UGGCUACCUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_142 not in the Motif Atlas

Homologous match to HL_7RQB_001

Geometric discrepancy: 0.1066

The information below is about HL_7RQB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_99167.2

Basepair signature

cWW-F-F-cSH-F-F

Number of instances in this motif group

6

Unit IDs

6NUO|1|YA|U|58
6NUO|1|YA|G|59
6NUO|1|YA|G|60
6NUO|1|YA|C|61
6NUO|1|YA|U|62
6NUO|1|YA|A|63
6NUO|1|YA|C|64
6NUO|1|YA|C|65
6NUO|1|YA|U|66
6NUO|1|YA|G|67

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y2

50S ribosomal protein L29

Chain Y7

50S ribosomal protein L34

Chain YX

50S ribosomal protein L23