HL_6NUO_162

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAACAG

Length

7 nucleotides

Bulged bases

6NUO|1|YA|C|670

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_162 not in the Motif Atlas

Homologous match to HL_4WF9_021

Geometric discrepancy: 0.2967

The information below is about HL_4WF9_021

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

6NUO|1|YA|C|666
6NUO|1|YA|G|667
6NUO|1|YA|A|668
6NUO|1|YA|A|669
6NUO|1|YA|C|670
6NUO|1|YA|A|671
6NUO|1|YA|G|672

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y6

50S ribosomal protein L33

Chain Y8

50S ribosomal protein L35

Chain YP

50S ribosomal protein L15