HL_6NUO_180

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GCAAAUC

Length

7 nucleotides

Bulged bases

6NUO|1|YA|C|1539, 6NUO|1|YA|U|1543

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_180 not in the Motif Atlas

Homologous match to HL_7RQB_038

Geometric discrepancy: 0.1986

The information below is about HL_7RQB_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

6NUO|1|YA|G|1538
6NUO|1|YA|C|1539
6NUO|1|YA|A|1540
6NUO|1|YA|A|1541
6NUO|1|YA|A|1542
6NUO|1|YA|U|1543
6NUO|1|YA|C|1544

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YD

50S ribosomal protein L2