HL_6NUO_193

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

6NUO|1|YA|A|2052, 6NUO|1|YA|A|2053, 6NUO|1|YA|G|2054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_193 not in the Motif Atlas

Homologous match to HL_7RQB_050

Geometric discrepancy: 0.0811

The information below is about HL_7RQB_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.6

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

6

Unit IDs

6NUO|1|YA|G|2049
6NUO|1|YA|U|2050
6NUO|1|YA|G|2051
6NUO|1|YA|A|2052
6NUO|1|YA|A|2053
6NUO|1|YA|G|2054
6NUO|1|YA|A|2055
6NUO|1|YA|U|2056
6NUO|1|YA|G|2057
6NUO|1|YA|C|2058

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y5

50S ribosomal protein L32

Chain YE

50S ribosomal protein L3