HL_6NUO_223

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GACGGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_223 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.2839

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6NUO|1|YA|G|2316
6NUO|1|YA|A|2317
6NUO|1|YA|C|2318
6NUO|1|YA|G|2319
6NUO|1|YA|G|2320
6NUO|1|YA|A|2321
6NUO|1|YA|A|2322
6NUO|1|YA|A|2323
6NUO|1|YA|U|2324

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YG

50S ribosomal protein L5