HL_6O8W_088
3D structure
- PDB id
- 6O8W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 6O8W|1|a|U|808
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6O8W_088 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.1451
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
6O8W|1|a|G|801
6O8W|1|a|A|802
6O8W|1|a|U|803
6O8W|1|a|U|804
6O8W|1|a|A|805
6O8W|1|a|G|806
6O8W|1|a|A|807
6O8W|1|a|U|808
6O8W|1|a|A|809
6O8W|1|a|C|810
6O8W|1|a|C|811
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- 30S ribosomal protein S11
- Chain u
- Transfer RNA; tRNA
- Chain v
- mRNA
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