HL_6O8X_041

3D structure

PDB id

6O8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

AGAGUAU

Length

7 nucleotides

Bulged bases

6O8X|1|A|U|1677

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8X_041 not in the Motif Atlas

Homologous match to HL_5J7L_174

Geometric discrepancy: 0.2244

The information below is about HL_5J7L_174

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6O8X|1|A|A|1673
6O8X|1|A|G|1674
6O8X|1|A|A|1675
6O8X|1|A|G|1676
6O8X|1|A|U|1677
6O8X|1|A|A|1678
6O8X|1|A|U|1679

Current chains

Chain A

23S rRNA

Nearby chains