HL_6O90_025

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

6O90|1|A|U|867, 6O90|1|A|G|870

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O90_025 not in the Motif Atlas

Homologous match to HL_4WF9_025

Geometric discrepancy: 0.1672

The information below is about HL_4WF9_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.1

Basepair signature

cWW-F-F

Number of instances in this motif group

10

Unit IDs

6O90|1|A|U|866
6O90|1|A|U|867
6O90|1|A|U|868
6O90|1|A|A|869
6O90|1|A|G|870
6O90|1|A|G|871

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L15