HL_6O90_067

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UCUUUAAG

Length

8 nucleotides

Bulged bases

6O90|1|A|A|2813

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O90_067 not in the Motif Atlas

Geometric match to HL_5TBW_022

Geometric discrepancy: 0.3443

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

6O90|1|A|U|2807
6O90|1|A|C|2808
6O90|1|A|U|2809
6O90|1|A|U|2810
6O90|1|A|U|2811
6O90|1|A|A|2812
6O90|1|A|A|2813
6O90|1|A|G|2814

Current chains

Chain A

23S rRNA

Nearby chains