3D structure

PDB id
6OF6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
UAUUGAAGCA
Length
10 nucleotides
Bulged bases
6OF6|1|YA|C|574
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OF6_171 not in the Motif Atlas
Homologous match to HL_7RQB_018
Geometric discrepancy: 0.0648
The information below is about HL_7RQB_018
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_41998.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
69

Unit IDs

6OF6|1|YA|U|566
6OF6|1|YA|A|567
6OF6|1|YA|U|568
6OF6|1|YA|U|569
6OF6|1|YA|G|570
6OF6|1|YA|A|571
6OF6|1|YA|A|572
6OF6|1|YA|G|573
6OF6|1|YA|C|574
6OF6|1|YA|A|575

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y5
50S ribosomal protein L32
Chain YE
50S ribosomal protein L3
Chain YP
50S ribosomal protein L15
Chain YV
50S ribosomal protein L21

Coloring options:


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