HL_6OGF_047
3D structure
- PDB id
- 6OGF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 6OGF|1|1|A|1913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OGF_047 not in the Motif Atlas
- Homologous match to HL_9DFE_046
- Geometric discrepancy: 0.4113
- The information below is about HL_9DFE_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6OGF|1|1|G|1910
6OGF|1|1|U|1911
6OGF|1|1|A|1912
6OGF|1|1|A|1913
6OGF|1|1|C|1914
6OGF|1|1|U|1915
6OGF|1|1|A|1916
6OGF|1|1|U|1917
6OGF|1|1|A|1918
6OGF|1|1|A|1919
6OGF|1|1|C|1920
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 8
- Peptide chain release factor 2
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