HL_6OGG_020
3D structure
- PDB id
- 6OGG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GGUAACAC
- Length
- 8 nucleotides
- Bulged bases
- 6OGG|1|1|A|715, 6OGG|1|1|A|716
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OGG_020 not in the Motif Atlas
- Homologous match to HL_7RQB_022
- Geometric discrepancy: 0.4165
- The information below is about HL_7RQB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
6OGG|1|1|G|712
6OGG|1|1|G|713
6OGG|1|1|U|714
6OGG|1|1|A|715
6OGG|1|1|A|716
6OGG|1|1|C|717
6OGG|1|1|A|718
6OGG|1|1|C|719
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain T
- 30S ribosomal protein S15
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