HL_6OGG_027
3D structure
- PDB id
- 6OGG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CUUAGAAGCAG
- Length
- 11 nucleotides
- Bulged bases
- 6OGG|1|1|U|1065, 6OGG|1|1|U|1066, 6OGG|1|1|A|1067, 6OGG|1|1|G|1068, 6OGG|1|1|A|1070, 6OGG|1|1|G|1071, 6OGG|1|1|C|1072
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OGG_027 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3583
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6OGG|1|1|C|1064
6OGG|1|1|U|1065
6OGG|1|1|U|1066
6OGG|1|1|A|1067
6OGG|1|1|G|1068
6OGG|1|1|A|1069
6OGG|1|1|A|1070
6OGG|1|1|G|1071
6OGG|1|1|C|1072
6OGG|1|1|A|1073
6OGG|1|1|G|1074
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 8
- Peptide chain release factor 2
Coloring options: