HL_6OGG_035
3D structure
- PDB id
- 6OGG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GCGACGGUUGUC
- Length
- 12 nucleotides
- Bulged bases
- 6OGG|1|1|A|1453, 6OGG|1|1|U|1460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OGG_035 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3723
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6OGG|1|1|G|1450
6OGG|1|1|C|1451
6OGG|1|1|G|1452
6OGG|1|1|A|1453
6OGG|1|1|C|1454
6OGG|1|1|G|1455
6OGG|1|1|G|1456
6OGG|1|1|U|1457
6OGG|1|1|U|1458
6OGG|1|1|G|1459
6OGG|1|1|U|1460
6OGG|1|1|C|1461
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain n
- 50S ribosomal protein L17
Coloring options: