HL_6OLE_117
3D structure
- PDB id
- 6OLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAGUCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 6OLE|1|u|C|17, 6OLE|1|u|G|18, 6OLE|1|u|G|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLE_117 not in the Motif Atlas
- Homologous match to HL_5HR6_001
- Geometric discrepancy: 0.5624
- The information below is about HL_5HR6_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78347.5
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
6OLE|1|u|C|13
6OLE|1|u|A|14
6OLE|1|u|G|15
6OLE|1|u|U|16
6OLE|1|u|C|17
6OLE|1|u|G|18
6OLE|1|u|G|19
6OLE|1|u|U|20
6OLE|1|u|A|21
6OLE|1|u|G|22
Current chains
- Chain u
- AP RNA
Nearby chains
- Chain L
- 60S ribosomal protein L11
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
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