HL_6OLF_132
3D structure
- PDB id
- 6OLF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGGUUCCGG
- Length
- 9 nucleotides
- Bulged bases
- 6OLF|1|t|G|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLF_132 not in the Motif Atlas
- Geometric match to HL_9PN5_103
- Geometric discrepancy: 0.3794
- The information below is about HL_9PN5_103
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22758.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
6OLF|1|t|C|2683
6OLF|1|t|G|2684
6OLF|1|t|G|2685
6OLF|1|t|U|2686
6OLF|1|t|U|2687
6OLF|1|t|C|2688
6OLF|1|t|C|2689
6OLF|1|t|G|2690
6OLF|1|t|G|2691
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain S
- 60S ribosomal protein L19
- Chain V
- 60S ribosomal protein L22
- Chain Y
- 60S ribosomal protein L23a
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