HL_6OLG_023
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- ACGUGCAAAU
- Length
- 10 nucleotides
- Bulged bases
- 6OLG|1|A2|U|1578, 6OLG|1|A2|A|1582
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLG_023 not in the Motif Atlas
- Homologous match to HL_8C3A_020
- Geometric discrepancy: 0.1769
- The information below is about HL_8C3A_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.8
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
6OLG|1|A2|A|1575
6OLG|1|A2|C|1576
6OLG|1|A2|G|1577
6OLG|1|A2|U|1578
6OLG|1|A2|G|1579
6OLG|1|A2|C|1580
6OLG|1|A2|A|1581
6OLG|1|A2|A|1582
6OLG|1|A2|A|1583
6OLG|1|A2|U|1584
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A
- Cadherin-1
- Chain AB
- 60S ribosomal protein L3
- Chain AP
- 60S ribosomal protein L17
- Chain Aj
- 60S ribosomal protein L37
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