HL_6OLZ_059

3D structure

PDB id

6OLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UCAAACGGUAACG

Length

13 nucleotides

Bulged bases

6OLZ|1|A2|A|4176, 6OLZ|1|A2|C|4183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OLZ_059 not in the Motif Atlas

Homologous match to HL_8C3A_056

Geometric discrepancy: 0.1633

The information below is about HL_8C3A_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.9

Basepair signature

cWW-tHH-cWW-tHS-F-F-tWW

Number of instances in this motif group

8

Unit IDs

6OLZ|1|A2|U|4172
6OLZ|1|A2|C|4173
6OLZ|1|A2|A|4174
6OLZ|1|A2|A|4175
6OLZ|1|A2|A|4176
6OLZ|1|A2|C|4177
6OLZ|1|A2|G|4178
6OLZ|1|A2|G|4179
6OLZ|1|A2|U|4180
6OLZ|1|A2|A|4181
6OLZ|1|A2|A|4182
6OLZ|1|A2|C|4183
6OLZ|1|A2|G|4184

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AI

60S ribosomal protein L10

Chain AT

60S ribosomal protein L21

Chain Ab

60S ribosomal protein L29