HL_6OM7_013
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUCGCCGUGCC
- Length
- 11 nucleotides
- Bulged bases
- 6OM7|1|S2|G|385
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM7_013 not in the Motif Atlas
- Geometric match to HL_6UFM_001
- Geometric discrepancy: 0.3129
- The information below is about HL_6UFM_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_04642.3
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6OM7|1|S2|G|377
6OM7|1|S2|U|378
6OM7|1|S2|C|379
6OM7|1|S2|G|380
6OM7|1|S2|C|381
6OM7|1|S2|C|382
6OM7|1|S2|G|383
6OM7|1|S2|U|384
6OM7|1|S2|G|385
6OM7|1|S2|C|386
6OM7|1|S2|C|387
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SI
- 40S ribosomal protein S8
- Chain SL
- 40S ribosomal protein S11
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