HL_6OM7_040
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCCCGGAGCGC
- Length
- 11 nucleotides
- Bulged bases
- 6OM7|1|S2|G|1784
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM7_040 not in the Motif Atlas
- Geometric match to HL_5TBW_006
- Geometric discrepancy: 0.2016
- The information below is about HL_5TBW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
6OM7|1|S2|G|1749
6OM7|1|S2|C|1750
6OM7|1|S2|C|1751
6OM7|1|S2|C|1752
6OM7|1|S2|G|1779
6OM7|1|S2|G|1780
6OM7|1|S2|A|1781
6OM7|1|S2|G|1782
6OM7|1|S2|C|1783
6OM7|1|S2|G|1784
6OM7|1|S2|C|1785
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SG
- 40S ribosomal protein S6
- Chain X
- 60S ribosomal protein L24
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