HL_6OM7_059
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UCUUGAAACA
- Length
- 10 nucleotides
- Bulged bases
- 6OM7|1|t|C|1308
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM7_059 not in the Motif Atlas
- Homologous match to HL_5TBW_014
- Geometric discrepancy: 0.1623
- The information below is about HL_5TBW_014
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
6OM7|1|t|U|1300
6OM7|1|t|C|1301
6OM7|1|t|U|1302
6OM7|1|t|U|1303
6OM7|1|t|G|1304
6OM7|1|t|A|1305
6OM7|1|t|A|1306
6OM7|1|t|A|1307
6OM7|1|t|C|1308
6OM7|1|t|A|1309
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain b
- 60S ribosomal protein L27a
- Chain f
- 60S ribosomal protein L32
Coloring options: