HL_6OM7_131
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGUG(MA6)(MA6)CC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: MA6
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM7_131 not in the Motif Atlas
- Geometric match to HL_8KAH_003
- Geometric discrepancy: 0.2673
- The information below is about HL_8KAH_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89457.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
6OM7|1|S2|G|1846
6OM7|1|S2|G|1847
6OM7|1|S2|U|1848
6OM7|1|S2|G|1849
6OM7|1|S2|MA6|1850
6OM7|1|S2|MA6|1851
6OM7|1|S2|C|1852
6OM7|1|S2|C|1853
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SO
- 40S ribosomal protein S14
- Chain o
- 60S ribosomal protein L41
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
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