HL_6OM7_135
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGCGAGAA
- Length
- 8 nucleotides
- Bulged bases
- 6OM7|1|D|G|60
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OM7_135 not in the Motif Atlas
- Geometric match to HL_1ET4_001
- Geometric discrepancy: 0.3338
- The information below is about HL_1ET4_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86769.4
- Basepair signature
- cWW-cWW-cSH-F
- Number of instances in this motif group
- 5
Unit IDs
6OM7|1|D|U|55
6OM7|1|D|G|56
6OM7|1|D|C|57
6OM7|1|D|G|58
6OM7|1|D|A|59
6OM7|1|D|G|60
6OM7|1|D|A|61
6OM7|1|D|A|62
Current chains
- Chain D
- 5.8S ribosomal RNA
Nearby chains
- Chain Y
- 60S ribosomal protein L23a
- Chain i
- 60S ribosomal protein L35
- Chain k
- 60S ribosomal protein L37
- Chain t
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: