HL_6OPE_141

3D structure

PDB id

6OPE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6OPE|1|XA|U|1450, 6OPE|1|XA|A|1451, 6OPE|1|XA|G|1453

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OPE_141 not in the Motif Atlas

Geometric match to HL_5TBW_004

Geometric discrepancy: 0.3119

The information below is about HL_5TBW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86929.1

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

6OPE|1|XA|C|1449
6OPE|1|XA|U|1450
6OPE|1|XA|A|1451
6OPE|1|XA|C|1452
6OPE|1|XA|G|1453
6OPE|1|XA|G|1454

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20