HL_6ORE_081

3D structure

PDB id

6ORE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Release complex 70S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGUUAAUACCU

Length

11 nucleotides

Bulged bases

6ORE|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ORE_081 not in the Motif Atlas

Geometric match to HL_5J7L_017

Geometric discrepancy: 0.3857

The information below is about HL_5J7L_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

6ORE|1|2|A|461
6ORE|1|2|G|462
6ORE|1|2|U|463
6ORE|1|2|U|464
6ORE|1|2|A|465
6ORE|1|2|A|466
6ORE|1|2|U|467
6ORE|1|2|A|468
6ORE|1|2|C|469
6ORE|1|2|C|470
6ORE|1|2|U|471

Current chains

Chain 2

16S ribosomal RNA

Nearby chains