HL_6OSI_102

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

6OSI|1|RA|G|2751, 6OSI|1|RA|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_102 not in the Motif Atlas

Homologous match to HL_7RQB_066

Geometric discrepancy: 0.1562

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

6OSI|1|RA|C|2745
6OSI|1|RA|U|2746
6OSI|1|RA|G|2747
6OSI|1|RA|A|2748
6OSI|1|RA|A|2749
6OSI|1|RA|A|2750
6OSI|1|RA|G|2751
6OSI|1|RA|C|2752
6OSI|1|RA|A|2753
6OSI|1|RA|U|2754
6OSI|1|RA|C|2755
6OSI|1|RA|U|2756
6OSI|1|RA|A|2757
6OSI|1|RA|A|2758
6OSI|1|RA|G|2759

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36

Chain RH

50S ribosomal protein L6

Chain RN

50S ribosomal protein L13