HL_6OSK_012

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

6OSK|1|1|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSK_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.2531

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6OSK|1|1|A|382
6OSK|1|1|C|383
6OSK|1|1|A|384
6OSK|1|1|C|385
6OSK|1|1|G|386
6OSK|1|1|U|387
6OSK|1|1|G|388
6OSK|1|1|G|389
6OSK|1|1|U|390
6OSK|1|1|A|391
6OSK|1|1|U|392

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain X

50S ribosomal protein L28