3D structure

PDB id
6OSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated 70S complex at 60 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CGAAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OSK_033 not in the Motif Atlas
Homologous match to HL_5J7L_167
Geometric discrepancy: 0.0974
The information below is about HL_5J7L_167
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.7
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
349

Unit IDs

6OSK|1|1|C|1363
6OSK|1|1|G|1364
6OSK|1|1|A|1365
6OSK|1|1|A|1366
6OSK|1|1|A|1367
6OSK|1|1|G|1368

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain X
50S ribosomal protein L28
Chain d
50S ribosomal protein L34

Coloring options:


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