3D structure

PDB id
6OSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated 70S complex at 60 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
UUUAUUAAAAA
Length
11 nucleotides
Bulged bases
6OSK|1|1|A|1780, 6OSK|1|1|U|1781, 6OSK|1|1|U|1782, 6OSK|1|1|A|1786
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OSK_044 not in the Motif Atlas
Homologous match to HL_7RQB_045
Geometric discrepancy: 0.0886
The information below is about HL_7RQB_045
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_43613.5
Basepair signature
cWW-tWH-tWH-F
Number of instances in this motif group
6

Unit IDs

6OSK|1|1|U|1777
6OSK|1|1|U|1778
6OSK|1|1|U|1779
6OSK|1|1|A|1780
6OSK|1|1|U|1781
6OSK|1|1|U|1782
6OSK|1|1|A|1783
6OSK|1|1|A|1784
6OSK|1|1|A|1785
6OSK|1|1|A|1786
6OSK|1|1|A|1787

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain B
50S ribosomal protein L2
Chain d
50S ribosomal protein L34

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.119 s