HL_6OSQ_120

3D structure

PDB id

6OSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated state bound Release complex 70S at long incubation time point

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

6OSQ|1|1|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSQ_120 not in the Motif Atlas

Homologous match to HL_9DFE_047

Geometric discrepancy: 0.1116

The information below is about HL_9DFE_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

6OSQ|1|1|G|1949
6OSQ|1|1|G|1950
6OSQ|1|1|U|1951
6OSQ|1|1|A|1952
6OSQ|1|1|A|1953
6OSQ|1|1|G|1954
6OSQ|1|1|U|1955
6OSQ|1|1|U|1956
6OSQ|1|1|C|1957

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain A

Peptide chain release factor 1

Chain K

50S ribosomal protein L14