HL_6OST_065

3D structure

PDB id

6OST (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 pre-accommodated state bound Release complex 70S at 24ms

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

6OST|1|1|G|2751, 6OST|1|1|C|2755

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OST_065 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.1122

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

6OST|1|1|C|2745
6OST|1|1|U|2746
6OST|1|1|G|2747
6OST|1|1|A|2748
6OST|1|1|A|2749
6OST|1|1|A|2750
6OST|1|1|G|2751
6OST|1|1|C|2752
6OST|1|1|A|2753
6OST|1|1|U|2754
6OST|1|1|C|2755
6OST|1|1|U|2756
6OST|1|1|A|2757
6OST|1|1|A|2758
6OST|1|1|G|2759

Current chains

Chain 1

23S Ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L6

Chain J

50S ribosomal protein L13

Chain f

50S ribosomal protein L36