HL_6OST_086

3D structure

PDB id

6OST (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 pre-accommodated state bound Release complex 70S at 24ms

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

6OST|1|2|U|842

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OST_086 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.2643

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6OST|1|2|C|840
6OST|1|2|C|841
6OST|1|2|U|842
6OST|1|2|U|843
6OST|1|2|G|844
6OST|1|2|A|845
6OST|1|2|G|846

Current chains

Chain 2

16S Ribosomal RNA

Nearby chains

Chain w

30S ribosomal protein S18