HL_6OST_088

3D structure

PDB id

6OST (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 pre-accommodated state bound Release complex 70S at 24ms

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OST_088 not in the Motif Atlas

Homologous match to HL_5J7L_020

Geometric discrepancy: 0.1547

The information below is about HL_5J7L_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6OST|1|2|C|897
6OST|1|2|G|898
6OST|1|2|C|899
6OST|1|2|A|900
6OST|1|2|A|901
6OST|1|2|G|902

Current chains

Chain 2

16S Ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA