HL_6OT3_012

3D structure

PDB id

6OT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound Release complex 70S at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

6OT3|1|1|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OT3_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1372

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6OT3|1|1|A|382
6OT3|1|1|C|383
6OT3|1|1|A|384
6OT3|1|1|C|385
6OT3|1|1|G|386
6OT3|1|1|U|387
6OT3|1|1|G|388
6OT3|1|1|G|389
6OT3|1|1|U|390
6OT3|1|1|A|391
6OT3|1|1|U|392

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain X

50S ribosomal protein L28