HL_6OUO_094

3D structure

PDB id

6OUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound 70S complex at long incubation time

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

6OUO|1|2|G|1094

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OUO_094 not in the Motif Atlas

Homologous match to HL_5J7L_024

Geometric discrepancy: 0.1331

The information below is about HL_5J7L_024

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

6OUO|1|2|G|1089
6OUO|1|2|U|1090
6OUO|1|2|U|1091
6OUO|1|2|A|1092
6OUO|1|2|A|1093
6OUO|1|2|G|1094
6OUO|1|2|U|1095
6OUO|1|2|C|1096

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S2

Chain l

30S ribosomal protein S7

Chain z

30S ribosomal protein S21