HL_6PC7_012

3D structure

PDB id

6PC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 46

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

6PC7|1|I|G|386, 6PC7|1|I|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6PC7_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.131

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6PC7|1|I|A|382
6PC7|1|I|C|383
6PC7|1|I|A|384
6PC7|1|I|C|385
6PC7|1|I|G|386
6PC7|1|I|U|387
6PC7|1|I|G|388
6PC7|1|I|G|389
6PC7|1|I|U|390
6PC7|1|I|A|391
6PC7|1|I|U|392

Current chains

Chain I

23S ribosomal RNA

Nearby chains