HL_6PCH_082

3D structure

PDB id

6PCH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

6PCH|1|I|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6PCH_082 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1414

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6PCH|1|I|A|382
6PCH|1|I|C|383
6PCH|1|I|A|384
6PCH|1|I|C|385
6PCH|1|I|G|386
6PCH|1|I|U|387
6PCH|1|I|G|388
6PCH|1|I|G|389
6PCH|1|I|U|390
6PCH|1|I|A|391
6PCH|1|I|U|392

Current chains

Chain I

23S ribosomal RNA

Nearby chains