HL_6QNQ_220
3D structure
- PDB id
- 6QNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome initiation complex (IC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GGGCUCAUAACCC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6QNQ_220 not in the Motif Atlas
- Homologous match to HL_6GSL_221
- Geometric discrepancy: 0.4426
- The information below is about HL_6GSL_221
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06285.3
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6QNQ|1|3L|G|30
6QNQ|1|3L|G|31
6QNQ|1|3L|G|32
6QNQ|1|3L|C|33
6QNQ|1|3L|U|34
6QNQ|1|3L|C|35
6QNQ|1|3L|A|36
6QNQ|1|3L|U|37
6QNQ|1|3L|A|38
6QNQ|1|3L|A|39
6QNQ|1|3L|C|40
6QNQ|1|3L|C|41
6QNQ|1|3L|C|42
Current chains
- Chain 3L
- E. coli tRNAfMet
Nearby chains
- Chain 1G
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2A
- 30S ribosomal protein S11
- Chain 2L
- Transfer RNA; tRNA
- Chain 4L
- mRNA
- Chain 62
- 30S ribosomal protein S7
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